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我有一个使用 pacakge 的简单气球图ggpballoonplot

ggballoonplot(X, x = "cluster", y = "marker", size = "Relative.Expression",
              fill = "Median.Intensity", 
              ggtheme = theme_classic()) 

我想知道是否可以添加树状图并根据它组织气球图?我知道你可以做类似的事情,corrplot如:Dendrogram with Corrplot (R)但是很难将它应用到ggballoonplot函数中?

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1 回答 1

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经过几次尝试后,我发现将两者结合起来的最佳方法是:

### Build the dendrogram
dend <- as.dendrogram(hclust(d = dist(x = X)))
dendro.plot <- ggdendrogram(dend,rotate = TRUE)

### Use dendrogram order to order column
order <- order.dendrogram(dend) # dendrogram order
X$marker <- factor(x = X$marker,levels = X$marker[order],ordered = TRUE)

### then use grid to combine the two 
grid.newpage()
print(balloon.plot, vp = viewport(x = 0.4, y = 0.45, width = 0.8, height = 0.76))
print(dend, vp = viewport(x = 0.885, y = 0.435, width = 0.2, height = 0.84))

## requires trial and error to get it into the right position. 
## Also ensure that xticks and yticks and labels are set to blank.

欢迎替代解决方案。

于 2020-06-29T17:58:32.607 回答