我正在尝试在 Windows 10 机器上使用RTools4.0R构建一个包。我的包需要 SBML C 库和用于在 Window 上构建 R 包的 SBML 静态库由链接提供RTools4.0
我能够成功安装RTools4.0和附加的 SBML 库。我检查了我是否有 SBML 的头文件
C:\rtools40\mingw64\include\sbml>和libsbml.a文件 n
C:\rtools40\mingw64\lib>
更新了最新信息
我的包在 Mac OSX (Mojave) 上成功构建（没有RTools4.0），但是我在 Windows 上安装包时遇到了问题。
我的Makevars.win文件内容如下：
CXX=clang++
PKG_CPPFLAGS= -I/mingw$(WIN)/include/
PKG_LIBS= $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) -lsbml -lbz2 -lz -lxml2 -liconv -lws2_32
我可以rtools40使用以下命令从内部选择和构建包RStudio
Sys.setenv(PATH = paste("C:/rtools40/mingw64/bin", Sys.getenv("PATH"), sep=";"))
Sys.setenv(PATH = paste("C:/rtools40/mingw32/bin", Sys.getenv("PATH"), sep=";"))
Sys.setenv(BINPREF = "C:/rtools40/mingw32/bin/")
devtools::install()
我得到的错误如下：
Installing Rcppsbml
"C:/PROGRA~1/R/R-34~1.1/bin/x64/R" --no-site-file --no-environ --no-save \
--no-restore --quiet CMD INSTALL \
"C:/Users/sn248/Documents/GitHub/Rcppsbml" \
--library="C:/Users/sn248/Documents/R/win-library/3.4" \
--install-tests
* installing *source* package 'Rcppsbml' ...
** libs
*** arch - i386
C:/rtools40/mingw32/bin/g++ -I"C:/PROGRA~1/R/R-34~1.1/include" -DNDEBUG -I/mingw32/include/ -I"C:/Users/sn248/Documents/R/win-library/3.4/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include" -O2 -Wall -mtune=core2 -c convertReactions.cpp -o convertReactions.o
C:/rtools40/mingw32/bin/g++ -I"C:/PROGRA~1/R/R-34~1.1/include" -DNDEBUG -I/mingw32/include/ -I"C:/Users/sn248/Documents/R/win-library/3.4/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include" -O2 -Wall -mtune=core2 -c printSBML.cpp -o printSBML.o
C:/rtools40/mingw32/bin/g++ -I"C:/PROGRA~1/R/R-34~1.1/include" -DNDEBUG -I/mingw32/include/ -I"C:/Users/sn248/Documents/R/win-library/3.4/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include" -O2 -Wall -mtune=core2 -c rcpp_hello.cpp -o rcpp_hello.o
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o Rcppsbml.dll tmp.def convertReactions.o printSBML.o rcpp_hello.o -LC:/PROGRA~1/R/R-34~1.1/bin/i386 -lRlapack -LC:/PROGRA~1/R/R-34~1.1/bin/i386 -lRblas -lgfortran -lm -lquadmath -lsbml -lbz2 -lz -lxml2 -liconv -lws2_32 -Ld:/Compiler/gcc-4.9.3/local330/lib/i386 -Ld:/Compiler/gcc-4.9.3/local330/lib -LC:/PROGRA~1/R/R-34~1.1/bin/i386 -lR
installing to C:/Users/sn248/Documents/R/win-library/3.4/Rcppsbml/libs/i386
*** arch - x64
C:/rtools40/mingw32/bin/g++ -I"C:/PROGRA~1/R/R-34~1.1/include" -DNDEBUG -I/mingw64/include/ -I"C:/Users/sn248/Documents/R/win-library/3.4/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include" -O2 -Wall -mtune=core2 -c convertReactions.cpp -o convertReactions.o
C:/rtools40/mingw32/bin/g++ -I"C:/PROGRA~1/R/R-34~1.1/include" -DNDEBUG -I/mingw64/include/ -I"C:/Users/sn248/Documents/R/win-library/3.4/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include" -O2 -Wall -mtune=core2 -c printSBML.cpp -o printSBML.o
C:/rtools40/mingw32/bin/g++ -I"C:/PROGRA~1/R/R-34~1.1/include" -DNDEBUG -I/mingw64/include/ -I"C:/Users/sn248/Documents/R/win-library/3.4/Rcpp/include" -I"d:/Compiler/gcc-4.9.3/local330/include" -O2 -Wall -mtune=core2 -c rcpp_hello.cpp -o rcpp_hello.o
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o Rcppsbml.dll tmp.def convertReactions.o printSBML.o rcpp_hello.o -LC:/PROGRA~1/R/R-34~1.1/bin/x64 -lRlapack -LC:/PROGRA~1/R/R-34~1.1/bin/x64 -lRblas -lgfortran -lm -lquadmath -lsbml -lbz2 -lz -lxml2 -liconv -lws2_32 -Ld:/Compiler/gcc-4.9.3/local330/lib/x64 -Ld:/Compiler/gcc-4.9.3/local330/lib -LC:/PROGRA~1/R/R-34~1.1/bin/x64 -lR
C:/PROGRA~1/R/R-34~1.1/bin/x64/Rlapack.dll: file not recognized: file format not recognized
collect2.exe: error: ld returned 1 exit status
no DLL was created
ERROR: compilation failed for package 'Rcppsbml'
* removing 'C:/Users/sn248/Documents/R/win-library/3.4/Rcppsbml'
* restoring previous 'C:/Users/sn248/Documents/R/win-library/3.4/Rcppsbml'
Error: Command failed (1)
我有点理解为什么我会收到错误，因为即使 for ，也正在使用x6432 位编译器。C:/rtools40/mingw32/bin/g++我不知道如何编写选项来选择正确的编译器，x64因为BINPREF只需要 1 个目录作为输入。
我的R.version信息如下：
> R.version
_
platform x86_64-w64-mingw32
arch x86_64
os mingw32
system x86_64, mingw32
status
major 3
minor 4.1
year 2017
month 06
day 30
svn rev 72865
language R
version.string R version 3.4.1 (2017-06-30)
nickname Single Candle
完整的包代码可以在 - https://github.com/sn248/Rcppsbml
从上面可以看出，我正在使用R-3.4.1（由于非技术问题我现在无法更新）和另一个版本的 Rtools（适用于R-3.4.1）也安装在我的机器上。
我的问题如下：
无论如何在使用'选项rtools40构建包时指定使用？RStudioClean and Rebuild
即使我能够在我的机器上安装这个库，它是否适用于CRAN检查？
非常感谢这里的任何帮助，谢谢！