我不知道这个问题是否合适。如果不是,我很抱歉。我是 fortran 的新用户,花了很多时间在下面的东西上。
我构造了一个名为“loglike”的函数,它根据两个参数返回一个实数。我想用这个函数来构造一个mcmc算法
是这样的。
psi = min(0, loglike(propalpha,propbeta) - loglike(currentalpha,currentbeta))
其中propalpha = currentalpha + noise
, 和propbeta = currentbeta + noise
, 噪声是来自某个分布的随机样本。
现在我想通过调用以前构造的函数“loglike”来使用这个算法。
1)如何为名为主程序的新程序调用函数'loglike'
2)如何将其用于子程序?
任何帮助对我来说都非常棒。提前致谢
编辑:
module mcmc
implicit none
contains
subroutine subru(A,B, alphaprop, betaprop)
real, intent(in)::A,B
real, intent(out)::alphaprop, betaprop
end subroutine subru
real function aloglike(A,B)
real:: A,B,U, aloglike
aloglike = U
end function aloglike
end module mcmc
program likelihood
use mcmc
implicit none
real :: alpha,beta,dist1,dist2,prob1,prob2
real:: psi,a(1000),b(1000), u1, u2,u, alphaprop, betaprop
real, dimension(1:1):: loglike
integer :: t,i,j,k,l
real, dimension(1:625):: x
real, dimension(1:625):: y
integer, dimension(1:625):: inftime
alpha = 0.5
beta = 2.0
open(10, file = 'epidemic.txt', form = 'formatted')
do l = 1,625
read(10,*,end = 200) x(l), y(l), inftime(l)
enddo
200 continue
loglike = 0.0
do t=1,10
do i=1,625
if(inftime(i)==0 .or. t < (inftime(i)-1)) then
dist1 = 0.0
do j = 1, 625
if(t >= inftime(j) .and. inftime(j)/=0)then
dist1 = dist1 + sqrt((x(i) - x(j))**2 + (y(i) - y(j))**2)**(-beta)
endif
enddo
prob1 = 1 - exp(-alpha * dist1)
loglike = loglike + log(1 - prob1)
endif
if(inftime(i) .eq. (t+1)) then
dist2 = 0.0
do k=1, 625
if(t >= inftime(k) .and. inftime(k)/=0) then
dist2 = dist2 + sqrt((x(i) - x(k))**2 + (y(i) - y(k))**2)**(-beta)
endif
enddo
prob2 = 1 - exp(-alpha * dist2)
loglike = loglike + log(prob2)
endif
enddo
enddo
do i = 2, 1000
a(1)= 0.0
b(1) = 0.0
call subru(a(i),b(i), alphaprop, betaprop)
call random_number(u1)
call random_number(u2)
alphaprop = a(i-1) + (u1*0.4)-0.2
betaprop= b(i-1) + (u2*0.4)-0.2
if(alphaprop> 0 .and. alphaprop < 0.2 .and. betaprop > 0 .and. betaprop < 0.2)then
psi = min(0.0,aloglike(alphaprop,betaprop)- aloglike(a(i-1),b(i-1)))
call random_number(u)
if(u < psi)then
a(i)= alphaprop
b(i) = betaprop
else
a(i) = a(i-1)
b(i) = b(i-1)
endif
endif
enddo
do j = 1, 1000
print *, A(j), A(j), LOGLIKE
enddo
end program