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我已经解决这个问题好几天了,不得不得出结论,我需要你们的帮助!

信息:Python 版本:3.8.2 Pip 版本:20.0.2

更新了 Setuptools Setuptools 轮 Python-language-server

使用 pip 使用以下命令安装模块 python -m pip install pysam 或 python -m pip install C:\Users\NDSNIVE\Downloads\pysam-master.zip

完整的错误代码

ERROR: Command errored out with exit status 1:
 command: 'c:\program files\python38\python.exe' -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'C:\\Users\\NDSNIVE\\AppData\\Local\\Temp\\pip-req-build-_mdk7oi0\\setup.py'"'"'; __file__='"'"'C:\\Users\\NDSNIVE\\AppData\\Local\\Temp\\pip-req-build-_mdk7oi0\\setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base 'C:\Users\NDSNIVE\AppData\Local\Temp\pip-req-build-_mdk7oi0\pip-egg-info'
     cwd: C:\Users\NDSNIVE\AppData\Local\Temp\pip-req-build-_mdk7oi0\
Complete output (23 lines):
# pysam: cython is available - using cythonize if necessary
# pysam: htslib mode is shared
# pysam: HTSLIB_CONFIGURE_OPTIONS=None
'.' is not recognized as an internal or external command,
operable program or batch file.
'.' is not recognized as an internal or external command,
operable program or batch file.
Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "C:\Users\NDSNIVE\AppData\Local\Temp\pip-req-build-_mdk7oi0\setup.py", line 241, in <module>
    htslib_make_options = run_make_print_config()
  File "C:\Users\NDSNIVE\AppData\Local\Temp\pip-req-build-_mdk7oi0\setup.py", line 68, in run_make_print_config
    stdout = subprocess.check_output(["make", "-s", "print-config"])
  File "c:\program files\python38\lib\subprocess.py", line 411, in check_output
    return run(*popenargs, stdout=PIPE, timeout=timeout, check=True,
  File "c:\program files\python38\lib\subprocess.py", line 489, in run
    with Popen(*popenargs, **kwargs) as process:
  File "c:\program files\python38\lib\subprocess.py", line 854, in __init__
    self._execute_child(args, executable, preexec_fn, close_fds,
  File "c:\program files\python38\lib\subprocess.py", line 1307, in _execute_child
    hp, ht, pid, tid = _winapi.CreateProcess(executable, args,
FileNotFoundError: [WinError 2] Den angivne fil blev ikke fundet
# pysam: htslib configure options: None
----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
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1 回答 1

0

pysam仅与这些操作系统兼容(来自pypi),而不是 windows:

操作系统

MacOS
POSIX
Unix
于 2020-03-15T12:00:39.260 回答