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我正在构建一个.so从 C 构建的共享对象 ( ) 文件，以便从 R 中使用。我在将对象与所有源代码、测试代码和头文件链接/编译时遇到问题。

该.so文件将dyn.load()在 R 中使用并调用相应的函数来加载。

这是文件的结构：

C_header_file1.h // some support functions
C_src_file1.h    // some source code for support functions
C_header_file2.h // some other support functions
C_src_file2.h    // some source code for support functions
C_header_testfunctions.h // testing functions that are called from R for testing
C_src_testfunctions.c  // source code for test functions
C_file_with_main_calling_functions.c // main src file which takes functions from header files (not test header file) to do stuff
C_file_with_main_extern_vars.h // has extern global variables

该C_file_with_main_calling_functions.c文件有一组全局变量（随机数生成器细节），可以通过C_file_with_main_calling_functions.c（当用户从​​ R 调用主函数时）和C_src_testfunctions.c（当用户在测试阶段从 R 调用测试函数时）访问它们.

C_file_with_main_extern_vars.h好像：

// random number generation set up
extern const gsl_rng *gBaseRand;       // global rand number generator
extern unsigned long randSeed;
extern const double lowest_double = -GSL_DBL_MAX;
extern const double highest_double = GSL_DBL_MAX;
extern FILE *fp = NULL;

两者都有。C_file_with_main_calling_functions.c_C_src_testfunctions.c#include "C_file_with_main_extern_vars.h"

如何创建共享对象？它给了我以下错误：

R CMD SHLIB C_file_with_main_calling_functions.c ./../test/C_src_testfunctions.c ./../src/src_file1.c ./../src/src_file2.c ./../src/src_file3.c ./../src/src_file6.c ./../src/src_file5.c -lgsl -lgslcblas
gcc -std=gnu99 -I/usr/local/R.framework/Resources/include -DNDEBUG  -I/sw/include -I/usr/local/include    -fPIC  -g -O2  -c C_file_with_main_calling_functions.c -o C_file_with_main_calling_functions.o
In file included from C_file_with_main_calling_functions.c:35:
/mydir/C/include/C_file_with_main_calling_functions.h:15: warning: 'lowest_double' initialized and declared 'extern'
/mydir/C/include/C_file_with_main_calling_functions.h:16: warning: 'highest_double' initialized and declared 'extern'
/mydir/C/include/C_file_with_main_calling_functions.h:17: warning: 'fp' initialized and declared 'extern'
C_file_with_main_calling_functions.c: In function 'func2':
C_file_with_main_calling_functions.c:54: warning: implicit declaration of function 'func1'
C_file_with_main_calling_functions.c: At top level:
C_file_with_main_calling_functions.c:61: warning: conflicting types for 'func1'
C_file_with_main_calling_functions.c:54: warning: previous implicit declaration of 'func1' was here
C_file_with_main_calling_functions.c: In function 'C_file_with_main_calling_functionsC':
C_file_with_main_calling_functions.c:207: warning: passing argument 1 of 'func2' from incompatible pointer type
C_file_with_main_calling_functions.c:271: warning: passing argument 1 of 'gsl_rng_free' discards qualifiers from pointer target type
gcc -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/sw/lib -L/usr/local/lib -o C_file_with_main_calling_functions.so C_file_with_main_calling_functions.o ./../test/C_src_testfunctions.o ./../src/src_file1.o ./../src/src_file2.o ./../src/src_file3.o ./../src/src_file6.o ./../src/src_file5.o -lgsl -lgslcblas -F/usr/local/R.framework/.. -framework R -lintl -Wl,-framework -Wl,CoreFoundation
duplicate symbol _fp in:
    C_file_with_main_calling_functions.o
    ./../test/C_src_testfunctions.o
duplicate symbol _lowest_double in:
    C_file_with_main_calling_functions.o
    ./../test/C_src_testfunctions.o
duplicate symbol _highest_double in:
    C_file_with_main_calling_functions.o
    ./../test/C_src_testfunctions.o
ld: 3 duplicate symbols for architecture x86_64
collect2: ld returned 1 exit status
make: *** [C_file_with_main_calling_functions.so] Error 1

我也不想要两个单独的共享对象（一个用于测试，一个供用户使用）（我已经尝试过并且有效）。

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1 回答 1

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在 C 语言中，初始化是定义。

让我们考虑一个简单的例子：decl.h文件包含单个声明

#ifdef CORR
extern int i;
#else
extern int i = 5;
#endif

decl.c文件包含定义：

#include "decl.h"
int i = 5;
int foo() { return i; }

现在编译，gcc -DCORR decl.c -c你不会看到任何问题，但是如果你尝试在extern声明中使用初始化编译，你会得到多重定义错误。

所以你的头文件只需要包含声明，可能看起来像：

extern const gsl_rng *gBaseRand;
extern unsigned long randSeed;
extern const double lowest_double;
extern const double highest_double;
extern FILE *fp;

在任何 C 文件中，例如C_file_with_main_calling_functions.c，您可以放置​​一些定义：

const gsl_rng *gBaseRand;       // global rand number generator
unsigned long randSeed;
const double lowest_double = -GSL_DBL_MAX;
const double highest_double = GSL_DBL_MAX;
FILE *fp = NULL;

然后一切都应该编译和链接没有错误。

于 2013-11-14T12:53:01.897 回答