python - Mac os x 10.8 上的 Homebrew + Python：致命 Python 错误：PyThreadState_Get：没有当前线程正在导入 mapnik

Question

我的 Mac (10.8.3) 上有 2 条蟒蛇：默认版本和 2.7 版本的自制软件。

到目前为止，我可以安装模块并将它们与我的 brew python 一起使用。我用brew install mapnik（mapnik-2.1.0）安装了mapnik，它编译正确。但是，如果我打开 python 并输入，则会import mapnik出现以下错误并且 python 退出：

>>> import mapnik
Fatal Python error: PyThreadState_Get: no current thread
Abort trap: 6

Mac os x 也显示错误窗口，内容如下：

Process:         Python [60666]
Path:            /usr/local/Cellar/python/2.7.3/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python
Identifier:      Python
Version:         2.7.3 (2.7.3)
Code Type:       X86-64 (Native)
Parent Process:  bash [60454]
User ID:         501

Date/Time:       2013-03-28 10:21:08.535 +0100
OS Version:      Mac OS X 10.8.3 (12D78)
Report Version:  10

Interval Since Last Report:          128837 sec
Crashes Since Last Report:           5
Per-App Crashes Since Last Report:   4
Anonymous UUID:                      567121E6-7BAC-335F-E3B0-DD24D1F9E6BA

Crashed Thread:  0  Dispatch queue: com.apple.main-thread

Exception Type:  EXC_CRASH (SIGABRT)
Exception Codes: 0x0000000000000000, 0x0000000000000000

Application Specific Information:
abort() called

Thread 0 Crashed:: Dispatch queue: com.apple.main-thread
0   libsystem_kernel.dylib          0x00007fff94500d46 __kill + 10
1   libsystem_c.dylib               0x00007fff92afddf0 abort + 177
2   org.python.python               0x0000000105a77eaa Py_FatalError + 49
3   org.python.python               0x0000000105a76370 PyThreadState_Get + 28
4   org.python.python               0x0000000105a71f16 Py_InitModule4_64 + 58
5   libboost_python-mt.dylib        0x0000000104153288 boost::python::detail::init_module(char const*, void (*)()) + 40
6   org.python.python               0x00000001029fa716 _PyImport_LoadDynamicModule + 150
7   org.python.python               0x00000001029fa428 import_submodule + 296
8   org.python.python               0x00000001029f9ff1 load_next + 268
9   org.python.python               0x00000001029f80fb PyImport_ImportModuleLevel + 794
10  org.python.python               0x00000001029de9d3 builtin___import__ + 132
11  org.python.python               0x000000010296e335 PyObject_Call + 101
12  org.python.python               0x00000001029e8e10 PyEval_CallObjectWithKeywords + 93
13  org.python.python               0x00000001029e61b6 PyEval_EvalFrameEx + 11727
14  org.python.python               0x00000001029e32bd PyEval_EvalCodeEx + 1638
15  org.python.python               0x00000001029e2c51 PyEval_EvalCode + 54
16  org.python.python               0x00000001029f6e58 PyImport_ExecCodeModuleEx + 247
17  org.python.python               0x00000001029f99bf load_source_module + 1053
18  org.python.python               0x00000001029f9c7e load_package + 334
19  org.python.python               0x00000001029fa428 import_submodule + 296
20  org.python.python               0x00000001029f9ff1 load_next + 268
21  org.python.python               0x00000001029f80fb PyImport_ImportModuleLevel + 794
22  org.python.python               0x00000001029de9d3 builtin___import__ + 132
23  org.python.python               0x000000010296e335 PyObject_Call + 101
24  org.python.python               0x00000001029e8e10 PyEval_CallObjectWithKeywords + 93
25  org.python.python               0x00000001029e61b6 PyEval_EvalFrameEx + 11727
26  org.python.python               0x00000001029e32bd PyEval_EvalCodeEx + 1638
27  org.python.python               0x00000001029e2c51 PyEval_EvalCode + 54
28  org.python.python               0x0000000102a01a2b run_mod + 53
29  org.python.python               0x0000000102a0184d PyRun_InteractiveOneFlags + 365
30  org.python.python               0x0000000102a01367 PyRun_InteractiveLoopFlags + 188
31  org.python.python               0x0000000102a01218 PyRun_AnyFileExFlags + 60
32  org.python.python               0x0000000102a120b2 Py_Main + 3210
33  libdyld.dylib                   0x00007fff966bf7e1 start + 1

Thread 0 crashed with X86 Thread State (64-bit):
  rax: 0x0000000000000000  rbx: 0x00007fff5d29c2b0  rcx: 0x00007fff5d29c298  rdx: 0x0000000000000000
  rdi: 0x000000000000ecfa  rsi: 0x0000000000000006  rbp: 0x00007fff5d29c2c0  rsp: 0x00007fff5d29c298
   r8: 0x00000000000003f5   r9: 0x00007fff5d29c270  r10: 0x00007fff94502342  r11: 0x0000000000000206
  r12: 0x00007fff5d29cb00  r13: 0x0000000102e9b656  r14: 0x00000000000003f5  r15: 0x0000000000000000
  rip: 0x00007fff94500d46  rfl: 0x0000000000000206  cr2: 0x00007fff7bff7ff0
Logical CPU: 0

Binary Images:
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External Modification Summary:
  Calls made by other processes targeting this process:
    task_for_pid: 0
    thread_create: 0
    thread_set_state: 0
  Calls made by this process:
    task_for_pid: 0
    thread_create: 0
    thread_set_state: 0
  Calls made by all processes on this machine:
    task_for_pid: 18730
    thread_create: 2
    thread_set_state: 0

VM Region Summary:
ReadOnly portion of Libraries: Total=109.5M resident=53.3M(49%) swapped_out_or_unallocated=56.2M(51%)
Writable regions: Total=20.6M written=2644K(13%) resident=3256K(15%) swapped_out=0K(0%) unallocated=17.5M(85%)

REGION TYPE                      VIRTUAL
===========                      =======
MALLOC                             11.8M
MALLOC guard page                    32K
STACK GUARD                        56.0M
Stack                              8192K
__DATA                             2356K
__LINKEDIT                         68.3M
__TEXT                             41.2M
__UNICODE                           544K
shared memory                        12K
===========                      =======
TOTAL                             188.2M

Model: MacBookPro8,2, BootROM MBP81.0047.B27, 4 processors, Intel Core i7, 2 GHz, 8 GB, SMC 1.69f4
Graphics: Intel HD Graphics 3000, Intel HD Graphics 3000, Built-In, 512 MB
Graphics: AMD Radeon HD 6490M, AMD Radeon HD 6490M, PCIe, 256 MB
Memory Module: BANK 0/DIMM0, 4 GB, DDR3, 1333 MHz, 0x80CE, 0x4D34373142353237334348302D4348392020
Memory Module: BANK 1/DIMM0, 4 GB, DDR3, 1333 MHz, 0x80CE, 0x4D34373142353237334348302D4348392020
AirPort: spairport_wireless_card_type_airport_extreme (0x14E4, 0xD6), Broadcom BCM43xx 1.0 (5.106.98.100.16)
Bluetooth: Version 4.1.3f3 11349, 2 service, 11 devices, 1 incoming serial ports
Network Service: Wi-Fi, AirPort, en1
Serial ATA Device: ST9500420AS, 500.11 GB
Serial ATA Device: MATSHITADVD-R   UJ-898
USB Device: FaceTime HD Camera (Built-in), apple_vendor_id, 0x8509, 0xfa200000 / 3
USB Device: hub_device, 0x0424  (SMSC), 0x2513, 0xfa100000 / 2
USB Device: Apple Internal Keyboard / Trackpad, apple_vendor_id, 0x0246, 0xfa120000 / 5
USB Device: BRCM2070 Hub, 0x0a5c  (Broadcom Corp.), 0x4500, 0xfa110000 / 4
USB Device: Bluetooth USB Host Controller, apple_vendor_id, 0x821a, 0xfa113000 / 8
USB Device: hub_device, 0x0424  (SMSC), 0x2513, 0xfd100000 / 2
USB Device: IR Receiver, apple_vendor_id, 0x8242, 0xfd110000 / 3

链接我的蟒蛇有什么问题吗？我该如何解决？谢谢！

score 12 · Accepted Answer

It looks like you are running the homebrew python but either boost python or mapnik's python bindings ended up linking against the system python provided by apple. If a full clean and reinstall of boost and Mapnik does not fix this then I recommend stopping by #mapnik irc on freenode for help debugging. Generally to fix you need to call otool -L on boost_python.dylib and or on site_packages/mapnik/_mapnik.so to see which ended up with a linkage to the system python. Then you can fix by using install_name_tool.

score 4 · Accepted Answer

我在 python27-apple 和 python27 （由 Macport 安装）之间遇到了同样的问题。我尝试了这些步骤，它对我有用。

根据@Evert 对不同python 使用的不同库的评论，我试图将python27-apple 恢复为“活动”。

sudo port select --list python

对于我的电脑，它显示：

Available versions for python:
none
python25-apple
python26
python26-apple
python27 (active)
python27-apple

其中python27（由Macport）当前处于活动状态。然后，

sudo port select python python27-apple

使 python27-apple 激活，因为之前调用了默认库。仔细检查，

sudo port select --list python

现在显示：

Available versions for python:
none
python25-apple
python26
python26-apple
python27
python27-apple (active)

当我运行脚本时，python 崩溃已经消失了。

score 2 · Accepted Answer

2

您可以像这样使用自制python：

/usr/bin/python2.7 yourscript.py

于 2017-02-04T22:14:54.173 回答

score 2 · Accepted Answer

我在使用时遇到了类似的问题androguard。虽然不太一样，但可以作为参考。我的崩溃也是Fatal Python error: PyThreadState_Get: no current thread Abort trap: 6。运行otool -L <lib>，提示dylib系统python的链接。尝试解决方案：

python-config --ldflags
将输出复制到相应的 MakeFile。例如更改LDFLAGS += -lm -lbz2 -lz -llzma -lsnappy -lmuparser -lpython为LDFLAGS += -lm -lbz2 -lz -llzma -lsnappy -lmuparser -L/usr/local/Cellar/python/2.7.10_2/Frameworks/Python.framework/Versions/2.7/lib/python2.7/config -lpython2.7 -ldl -framework CoreFoundation.
make clean，然后重新制作。

现在dylib没问题了，没有错误了。

或者 ...

...当您用于otool -L <lib>查找错误链接的 pythondylib时，您可以使用install_name_tool以下符号更改：

 install_name_tool -change /System/Library/Frameworks/Python.framework/Versions/2.7/Python /usr/local/Cellar/python/2.7.6_1/Frameworks/Python.framework/Versions/2.7/lib/libpython2.7.dylib  <lib>

python - Mac os x 10.8 上的 Homebrew + Python：致命 Python 错误：PyThreadState_Get：没有当前线程正在导入 mapnik

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或者 ...

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