I have a text file which has been previously readable in linux, then I modified some names in it manually on windows and now when I am running it on linux (using samtools), it cannot find exactly those names that I have changed manually
[faidx] Failed to fetch sequence in Mariner-1_Dhyd-L#DNA/Tc1-Mariner
I suspect this is the windows to linux problem? the current encoding of the file is
file -i filname.lib
filename.lib: text/plain; charset=us-ascii
then I tried to change it to Utf8
iconv -i us-ascii -t UTF8 filename.lib > filname-encode.lib
though the file encoding has still remained the same and still same errors. how should I fix it