10

我想获得最好的模型,以便稍后在笔记本中使用来预测使用不同的测试批次。

可重现的示例(取自 Optuna Github):

import lightgbm as lgb
import numpy as np
import sklearn.datasets
import sklearn.metrics
from sklearn.model_selection import train_test_split

import optuna


# FYI: Objective functions can take additional arguments
# (https://optuna.readthedocs.io/en/stable/faq.html#objective-func-additional-args).
def objective(trial):
    data, target = sklearn.datasets.load_breast_cancer(return_X_y=True)
    train_x, valid_x, train_y, valid_y = train_test_split(data, target, test_size=0.25)
    dtrain = lgb.Dataset(train_x, label=train_y)
    dvalid = lgb.Dataset(valid_x, label=valid_y)

    param = {
        "objective": "binary",
        "metric": "auc",
        "verbosity": -1,
        "boosting_type": "gbdt",
        "lambda_l1": trial.suggest_loguniform("lambda_l1", 1e-8, 10.0),
        "lambda_l2": trial.suggest_loguniform("lambda_l2", 1e-8, 10.0),
        "num_leaves": trial.suggest_int("num_leaves", 2, 256),
        "feature_fraction": trial.suggest_uniform("feature_fraction", 0.4, 1.0),
        "bagging_fraction": trial.suggest_uniform("bagging_fraction", 0.4, 1.0),
        "bagging_freq": trial.suggest_int("bagging_freq", 1, 7),
        "min_child_samples": trial.suggest_int("min_child_samples", 5, 100),
    }

    # Add a callback for pruning.
    pruning_callback = optuna.integration.LightGBMPruningCallback(trial, "auc")
    gbm = lgb.train(
        param, dtrain, valid_sets=[dvalid], verbose_eval=False, callbacks=[pruning_callback]
    )

    preds = gbm.predict(valid_x)
    pred_labels = np.rint(preds)
    accuracy = sklearn.metrics.accuracy_score(valid_y, pred_labels)
    return accuracy

我的理解是,下面的研究将调整准确性。我想以某种方式从研究中检索最佳模型(不仅仅是参数)而不将其保存为泡菜,我只想在笔记本的其他地方使用该模型。


if __name__ == "__main__":
    study = optuna.create_study(
        pruner=optuna.pruners.MedianPruner(n_warmup_steps=10), direction="maximize"
    )
    study.optimize(objective, n_trials=100)

    print("Best trial:")
    trial = study.best_trial

    print("  Params: ")
    for key, value in trial.params.items():
        print("    {}: {}".format(key, value))

所需的输出将是

best_model = ~model from above~
new_target_pred = best_model.predict(new_data_test)
metrics.accuracy_score(new_target_test, new__target_pred)

4

3 回答 3

12

@Toshihiko Yanase 的答案的简短补充,因为条件study.best_trial==trial对我来说从来都不是真的。当两个 (Frozen)Trial 对象具有相同的内容时,情况也是如此,因此这很可能是 Optuna 中的一个错误。改变条件study.best_trial.number==trial.number为我解决问题。

此外,如果您不想在 Python 中使用全局变量,您可以使用研究和试用用户属性

def objective(trial):
    gmb = ...
    trial.set_user_attr(key="best_booster", value=gbm)

def callback(study, trial):
    if study.best_trial.number == trial.number:
        study.set_user_attr(key="best_booster", value=trial.user_attrs["best_booster"])


if __name__ == "__main__":
    study = optuna.create_study(
        pruner=optuna.pruners.MedianPruner(n_warmup_steps=10), direction="maximize"
    )
    study.optimize(objective, n_trials=100, callbacks=[callback])
    best_model=study.user_attrs["best_booster"]
于 2020-08-11T19:46:14.677 回答
8

我知道这已经得到解答,使用 2020 年末发布的 optuna-lightgbm 集成 lightgbmtuner 有一种直接的方法。

简而言之,您可以执行您想做的事情,即按如下方式保存最佳助推器

import optuna.integration.lightgbm as lgb

dtrain = lgb.Dataset(X,Y,categorical_feature = 'auto')

params = {
"objective": "binary",
"metric": "auc",
"verbosity": -1,
"boosting_type": "gbdt",
}

tuner = lgb.LightGBMTuner(
     params, dtrain, verbose_eval=100, early_stopping_rounds=1000, 
  model_dir= 'directory_to_save_boosters'
)

tuner.run()

请注意,这里主要是指定一个model_dir目录来保存每次迭代中的模型。

通常不需要修剪回调,因为优化是使用贝叶斯方法和专家启发式方法的组合完成的,并且搜索通常在大约 60-64 次迭代中结束。

然后您可以使用单行从上面指定的模型目录中获取最佳模型

tuner.get_best_booster()
于 2021-03-03T16:37:36.253 回答
6

我认为您可以使用 的callback参数Study.optimize来保存最佳模型。在以下代码示例中,回调检查给定试验是否对应于最佳试验并将模型保存为全局变量best_booster

best_booster = None
gbm = None

def objective(trial):
    global gbm
    # ...

def callback(study, trial):
    global best_booster
    if study.best_trial == trial:
        best_booster = gbm

if __name__ == "__main__":
    study = optuna.create_study(
        pruner=optuna.pruners.MedianPruner(n_warmup_steps=10), direction="maximize"
    )
    study.optimize(objective, n_trials=100, callbacks=[callback])

如果将目标函数定义为类,则可以删除全局变量。我创建了一个笔记本作为代码示例。请看一下: https ://colab.research.google.com/drive/1ssjXp74bJ8bCAbvXFOC4EIycBto_ONp_?usp=sharing

我想以某种方式从研究中检索最佳模型(不仅仅是参数)而不将其保存为泡菜

仅供参考,如果您可以腌制助推器,我认为您可以按照此 FAQ简化代码。

于 2020-06-03T03:11:13.300 回答