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我需要使用CellProfiler 2.2.0,为此我需要vigra. 我按照您可以在此处找到的说明进行操作,或者至少按照我的解释进行操作。简而言之:

  1. 我克隆了 git 存储库。
  2. cd ~/git/vigra.
  3. mkdir一个要构建的目录和cd那个目录
  4. cmake

但是,当我make在步骤 5) 中想要这个包时,我遇到了这个问题:

swvanderlaan@Sanders-MBP ~/git
$ git clone git@github.com:ukoethe/vigra.git
Cloning into 'vigra'...
remote: Enumerating objects: 49815, done.
remote: Total 49815 (delta 0), reused 0 (delta 0), pack-reused 49815
Receiving objects: 100% (49815/49815), 106.46 MiB | 7.64 MiB/s, done.
Resolving deltas: 100% (36407/36407), done.

swvanderlaan@Sanders-MBP ~/git
$ cd vigra/

swvanderlaan@Sanders-MBP ~/git/vigra
$ ls
CMakeLists.txt      LICENSE.txt         README.md           azure-pipelines.yml config              docsrc              include             src                 test                vigranumpy

swvanderlaan@Sanders-MBP ~/git/vigra
$ mkdir -v build
mkdir: created directory 'build'

swvanderlaan@Sanders-MBP ~/git/vigra
$ cd build/

swvanderlaan@Sanders-MBP ~/git/vigra/build
$ cmake ../src/
-- The C compiler identification is AppleClang 10.0.1.10010046
-- The CXX compiler identification is AppleClang 10.0.1.10010046
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc
-- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++
-- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Warning (dev) in CMakeLists.txt:
  No cmake_minimum_required command is present.  A line of code such as

    cmake_minimum_required(VERSION 3.14)

  should be added at the top of the file.  The version specified may be lower
  if you wish to support older CMake versions for this project.  For more
  information run "cmake --help-policy CMP0000".
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done
-- Generating done
-- Build files have been written to: /Users/swvanderlaan/git/vigra/build

swvanderlaan@Sanders-MBP ~/git/vigra/build
$ make
Scanning dependencies of target vigraimpex
[  4%] Building CXX object impex/CMakeFiles/vigraimpex.dir/bmp.o
/Users/swvanderlaan/git/vigra/src/impex/bmp.cxx:38:10: fatal error: 'vigra/config.hxx' file not found
#include "vigra/config.hxx"
         ^~~~~~~~~~~~~~~~~~
1 error generated.
make[2]: *** [impex/CMakeFiles/vigraimpex.dir/bmp.o] Error 1
make[1]: *** [impex/CMakeFiles/vigraimpex.dir/all] Error 2
make: *** [all] Error 2

我该如何解决?

谢谢,最好的,

桑德

我的系统:macOS Mojave 10.14.5,带有brew

brew config
HOMEBREW_VERSION: 2.1.6
ORIGIN: https://github.com/Homebrew/brew
HEAD: fddf5b16bd8df577380a1d810d17825ef611b81f
Last commit: 3 weeks ago
Core tap ORIGIN: https://github.com/Homebrew/homebrew-core
Core tap HEAD: 6b7110635d52dbecd386c7c538b812da87dc2da3
Core tap last commit: 18 hours ago
HOMEBREW_PREFIX: /usr/local
CPU: octa-core 64-bit kabylake
Homebrew Ruby: 2.3.7 => /System/Library/Frameworks/Ruby.framework/Versions/2.3/usr/bin/ruby
Clang: 10.0 build 1001
Git: 2.22.0 => /usr/local/bin/git
Curl: 7.54.0 => /usr/bin/curl
Java: 1.8.0_212
macOS: 10.14.5-x86_64
CLT: 10.2.1.0.1.1554506761
Xcode: 10.2.1
CLT headers: 10.2.1.0.1.1554506761
XQuartz: 2.7.11 => /opt/X11
4

1 回答 1

1

在不编译任何东西的情况下在 Mac/Linux/Windows 上安装 vigra 的最简单方法是使用 conda:

conda install -c conda-forge vigra

注意: Vigra 支持许多可选的依赖项。该构建支持其中许多,但如果您对特定功能感兴趣,您可以查看 conda-forge 构建的 vigra 脚本:

https://github.com/conda-forge/vigra-feedstock/blob/master/recipe/build.sh

[我知道这个答案太晚了,没有帮助,而且听起来你并不真的需要 vigra。但希望这对任何可能遇到此页面的未来谷歌用户有用。]

于 2020-05-15T00:50:41.157 回答