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我已经使用 lmfit 大约一天了,不用说我对图书馆知之甚少。我一直在使用几个内置模型进行曲线拟合,除了对数正态模型外,它们都可以完美地处理数据。

这是我的代码:

from numpy import *
from lmfit.models import LognormalModel
import pandas as pd
import scipy.integrate as integrate

import matplotlib.pyplot as plt

data = pd.read_csv('./data.csv', delimiter = ",")
x = data.ix[:, 0]
y = data.ix[:, 1]

print (x)
print (y)

mod = LognormalModel()
pars = mod.guess(y, x=x)
out = mod.fit(y, pars , x=x)
print(out.best_values)
print(out.fit_report(min_correl=0.25))
out.plot()

plt.plot(x, y,         'bo')
plt.plot(x, out.init_fit, 'k--')
plt.plot(x, out.best_fit, 'r-')
plt.show()

错误输出是:

Traceback (most recent call last):
  File "Cs_curve_fit.py", line 17, in <module>
    pvout = pvmod.fit(y, amplitude= 1, center = 1, sigma =1 , x=x)
  File "C:\Users\NAME\Anaconda3\lib\site-packages\lmfit\model.py", line 731, in fit
    output.fit(data=data, weights=weights)
  File "C:\Users\NAME\Anaconda3\lib\site-packages\lmfit\model.py", line 944, in fit
    self.init_fit = self.model.eval(params=self.params, **self.userkws)
  File "C:\Users\NAME\Anaconda3\lib\site-packages\lmfit\model.py", line 569, in eval
    return self.func(**self.make_funcargs(params, kwargs))
  File "C:\Users\NAME\Anaconda3\lib\site-packages\lmfit\lineshapes.py", line 162, in lognormal
    x[where(x <= 1.e-19)] = 1.e-19
  File "C:\Users\NAME\Anaconda3\lib\site-packages\pandas\core\series.py", line 773, in __setitem__
    setitem(key, value)
  File "C:\Users\NAME\Anaconda3\lib\site-packages\pandas\core\series.py", line 755, in setitem
    raise ValueError("Can only tuple-index with a MultiIndex")
ValueError: Can only tuple-index with a MultiIndex
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1 回答 1

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首先,您显示的错误消息不能来自您发布的代码。错误消息说文件“Cs_curve_fit.py”的第 17 行读取

pvout = pvmod.fit(y, amplitude= 1, center = 1, sigma =1 , x=x)

但这不在您的代码中。请发布实际代码和实际输出。

其次,问题似乎正在发生,因为xis 的数据无法转换为一维 numpy 数组。由于无法信任您的代码或输出,我建议您自己将数据转换为 1D numpy 数组作为第一次测试。Lmfit 应该能够处理 Pandas 系列,但它只是对一维 numpy 数组进行简单的强制。

于 2017-05-27T12:26:04.167 回答