每次我尝试运行任何 qiime 脚本时,都会出现以下错误:
File "/usr/local/bin/assign_taxonomy.py", line 14, in <module>
from qiime.util import (parse_command_line_parameters, get_options_lookup,
File "/usr/local/lib/python2.7/dist-packages/qiime/util.py", line 49, in <module>
from skbio.util import remove_files, create_dir
File "/usr/local/lib/python2.7/dist-packages/skbio/__init__.py", line 15, in <module>
import skbio.io
File "/usr/local/lib/python2.7/dist-packages/skbio/io/__init__.py", line 309, in <module>
import_module('skbio.io.clustal')
File "/usr/lib/python2.7/importlib/__init__.py", line 37, in import_module
__import__(name)
File "/usr/local/lib/python2.7/dist-packages/skbio/io/clustal.py", line 123, in <module>
from skbio.alignment import Alignment
File "/usr/local/lib/python2.7/dist-packages/skbio/alignment/__init__.py", line 230, in <module>
from ._alignment import Alignment, SequenceCollection, StockholmAlignment
File "/usr/local/lib/python2.7/dist-packages/skbio/alignment/_alignment.py", line 21, in <module>
from skbio.stats.distance import DistanceMatrix
File "/usr/local/lib/python2.7/dist-packages/skbio/stats/__init__.py", line 45, in <module>
from ._subsample import subsample, subsample_counts, isubsample
ImportError: cannot import name subsample_counts
我有 Ubuntu 14.04.2 LTS(GNU/Linux 3.13.0-55-generic x86_64),qiime 1.9,python 2.7.6
有什么想法吗?