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I am trying to install Platypus and have gotten the following error message:

building 'htslibWrapper' extension
x86_64-linux-gnu-gcc -pthread -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fPIC -I/usr/include/python2.7 -c htslibWrapper.c -o build/temp.linux-x86_64-2.7/htslibWrapper.o -msse2 -msse3 -funroll-loops -D_LARGEFILE64_SOURCE -D_FILE_OFFSET_BITS=64 -fPIC
htslibWrapper.c:243:25: fatal error: htslib/bgzf.h: No such file or directory
 #include "htslib/bgzf.h"
                         ^
compilation terminated.
error: command 'x86_64-linux-gnu-gcc' failed with exit status 1

I am new to Bioinformatics and cannot seem to find a working solution online.

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2 回答 2

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有时,生物信息学应用程序并不能很好地描述它们的依赖关系。请参阅此链接以获取可能的解决方案

于 2015-07-23T03:57:16.603 回答
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从http://www.htslib.org/download/安装 htslib并将 c 头文件复制到 Platypus 根文件夹:

cp -r htslib-x.x.x/htslib platypus_folder/

再次构建

于 2015-11-05T08:52:22.627 回答