I have a function LogReg, which is as follows: (using justmarkham's code as inspiration)
def LogReg(self):
formulA = "class ~"
print self.frame #dataframe used
print self.columnNames[:-1]
for a in self.columnNames[:-1]:
formulA += " {0} +".format(a)
formula = formulA[:-2] #there is always a \n behind, we don't want that
print "formula = " + formula
Y,X = dmatrices(formula, self.frame, return_type="dataframe")
Y = np.ravel(Y) #flatten Y to a 1D list
model = LogisticRegression() #from sklearn.linear_model
model = model.fit(X, Y)
print model.score(X, Y)
with the following outcome:
a0 a1 a2 a3 class
picture1 1 2 3 67 1
picture2 6 7 45 61 3
picture3 8 7 6 5 2
picture4 1 2 4 3 0
['a0', 'a1', 'a2', 'a3']
formula = class ~ a0 + a1 + a2 + a3
Traceback (most recent call last):
File "classification.py", line 80, in <module>
c.LogReg()
File "classification.py", line 61, in LogReg
Y,X = dmatrices(formula, self.frame, return_type="dataframe")
File "/<path>/python2.7/site-packages/patsy/highlevel.py", line 297, in dmatrices
NA_action, return_type)
File "/<path>/python2.7/site-packages/patsy/highlevel.py", line 152, in _do_highlevel_design
NA_action)
File "/<path>/python2.7/site-packages/patsy/highlevel.py", line 57, in _try_incr_builders
NA_action)
File "/<path>/python2.7/site-packages/patsy/build.py", line 660, in design_matrix_builders
NA_action)
File "/<path>/python2.7/site-packages/patsy/build.py", line 424, in _examine_factor_types
value = factor.eval(factor_states[factor], data)
File "/<path>/python2.7/site-packages/patsy/eval.py", line 485, in eval
return self._eval(memorize_state["eval_code"], memorize_state, data)
File "/<path>/python2.7/site-packages/patsy/eval.py", line 468, in _eval
code, inner_namespace=inner_namespace)
File "/<path>/python2.7/site-packages/patsy/compat.py", line 117, in call_and_wrap_exc
return f(*args, **kwargs)
File "/<path>/python2.7/site-packages/patsy/eval.py", line 125, in eval
code = compile(expr, source_name, "eval", self.flags, False)
File "<string>", line 1
class
^
SyntaxError: unexpected EOF while parsing
I do not see what goes wrong here, as the string does by my knowledge not contain the EOF character, nor does the Python code seem erroneous. Therefore, the question: Where does it go wrong (and preferably: , and how to fix it)?
P.S.: The software used are all the most recent stable packages as available on 04/09/2015.