我正在远程机器上工作。输出uname -a
为:
Linux some-server.some-place.com 2.6.32-431.11.2.el6.x86_64 #1 SMP Tue Mar 25 19:59:55 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux
我在使用 R 包 rgeos 时遇到问题。这是一个快速的 R 会话:
> library(rgeos)
rgeos version: 0.3-8, (SVN revision 460)
GEOS runtime version: 3.4.2-CAPI-1.8.2 r3921
Polygon checking: TRUE
> version_GEOS()
[1] "3.4.2-CAPI-1.8.2 r3921"
> example(gDistance)
gDstnc> pt1 = readWKT("POINT(0.5 0.5)")
gDstnc> pt2 = readWKT("POINT(2 2)")
gDstnc> p1 = readWKT("POLYGON((0 0,1 0,1 1,0 1,0 0))")
gDstnc> p2 = readWKT("POLYGON((2 0,3 1,4 0,2 0))")
gDstnc> gDistance(pt1,pt2)
R: GeometryComponentFilter.cpp:34: virtual void geos::geom::GeometryComponentFilter::filter_ro(const geos::geom::Geometry*): Assertion `0' failed.
Process R exited abnormally with code 255 at Fri Feb 27 20:41:41 2015
我应该怎么做才能尝试解决这个问题?
谷歌搜索将我带到http://r-sig-geo.2731867.n2.nabble.com/gDistance-problem-on-RHEL-6-64-bit-td7587736.html。我尝试了一些建议,包括 running R -d gdb
,但输出基本相同:
> p1 = readWKT("POLYGON((0 0,1 0,1 1,0 1,0 0))")
> p2 = readWKT("POLYGON((2 0,3 1,4 0,2 0))")
> .Call("rgeos_distance", rgeos:::.RGEOS_HANDLE, p2, p1, c(FALSE, FALSE),
+
PACKAGE = "rgeos")
+ R: GeometryComponentFilter.cpp:34: virtual void geos::geom::GeometryComponentFilter::filter_ro(const geos::geom::Geometry*): Assertion `0' failed.
Program received signal SIGABRT, Aborted.
0x0000003b19c32925 in raise () from /lib64/libc.so.6
(gdb)
有什么建议么?
编辑:更多信息:
输出lsb_release -a
:
LSB Version: :base-4.0-amd64:base-4.0-noarch:core-4.0-amd64:core-4.0-noarch:graphics-4.0-amd64:graphics-4.0-noarch:printing-4.0-amd64:printing-4.0-noarch
Distributor ID: CentOS
Description: CentOS release 6.5 (Final)
Release: 6.5
Codename: Final
输出rpm -qa | grep geos
:
geos-devel-3.4.2-1.rhel6.x86_64
geos-3.4.2-1.rhel6.x86_64
输出rpm -qa | grep gdal
:
gdal-java-1.9.2-4.el6.x86_64
gdal-1.9.2-4.el6.x86_64
gdal-python-1.9.2-4.el6.x86_64
gdal-libs-1.9.2-4.el6.x86_64
gdal-devel-1.9.2-4.el6.x86_64
回声的输出$LD_LIBRARY_PATH
:
/opt/tomlab/shared
输出geos-config
:
/usr/bin/geos-config