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在尝试安装某些（或全部？）R 包时，我总是遇到以下类型的错误，在我看来，这不是特定于特定包，而是特定于我的R 环境。

> install.packages("plspm")
Installing package into ‘/home/ruser/R/x86_64-pc-linux-gnu-library/3.0’
(as ‘lib’ is unspecified)
also installing the dependencies ‘shape’, ‘amap’, ‘diagram’, ‘tester’, ‘turner’

trying URL 'http://cran.rstudio.com/src/contrib/shape_1.4.1.tar.gz'
Content type 'application/x-gzip' length 683458 bytes (667 Kb)
opened URL
==================================================
downloaded 667 Kb

trying URL 'http://cran.rstudio.com/src/contrib/amap_0.8-12.tar.gz'
Content type 'application/x-gzip' length 257611 bytes (251 Kb)
opened URL
==================================================
downloaded 251 Kb

trying URL 'http://cran.rstudio.com/src/contrib/diagram_1.6.2.tar.gz'
Content type 'application/x-gzip' length 466608 bytes (455 Kb)
opened URL
==================================================
downloaded 455 Kb

trying URL 'http://cran.rstudio.com/src/contrib/tester_0.1.7.tar.gz'
Content type 'application/x-gzip' length 112000 bytes (109 Kb)
opened URL
==================================================
downloaded 109 Kb

trying URL 'http://cran.rstudio.com/src/contrib/turner_0.1.7.tar.gz'
Content type 'application/x-gzip' length 106530 bytes (104 Kb)
opened URL
==================================================
downloaded 104 Kb

trying URL 'http://cran.rstudio.com/src/contrib/plspm_0.4.1.tar.gz'
Content type 'application/x-gzip' length 367040 bytes (358 Kb)
opened URL
==================================================
downloaded 358 Kb


The downloaded source packages are in
    ‘/tmp/RtmpJsgPbd/downloaded_packages’

> library(plspm)
Error in library(plspm) : there is no package called ‘plspm’

这是我的 R 环境信息：

> sessionInfo()
R version 3.0.3 (2014-03-06)
Platform: x86_64-pc-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C         LC_TIME=C           
 [4] LC_COLLATE=C         LC_MONETARY=C        LC_MESSAGES=C       
 [7] LC_PAPER=C           LC_NAME=C            LC_ADDRESS=C        
[10] LC_TELEPHONE=C       LC_MEASUREMENT=C     LC_IDENTIFICATION=C 

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] RCurl_1.95-4.1 bitops_1.0-6  

loaded via a namespace (and not attached):
[1] tools_3.0.3

在 RStudio 中，我还尝试指定dependencies=TRUEininstall.packages()并指定type="source"（无论如何这在 Linux 上都是默认设置），但无济于事。

似乎我总是能够通过从命令行（作为ruser用户）手动成功安装 R 包来克服这个问题，这次也是如此：

R CMD INSTALL --build <'plspm' dependencies and their dependencies>
R CMD INSTALL --build plspm_0.4.1.tar.gz

> library(plspm)
Loading required package: amap
Loading required package: diagram
Loading required package: shape
Loading required package: tester
Loading required package: turner

> installed.packages()
           Package      LibPath
plspm      "plspm"      "/home/ruser/R/x86_64-pc-linux-gnu-library/3.0"

           Version      Priority
plspm      "0.4.1"      NA

           Depends
plspm      "R (>= 3.0.1), amap, diagram, tester, turner"

           NeedsCompilation Built
plspm      "no"             "3.0.3"

问题

为什么我能够plspm通过手动安装其依赖项，然后在从 Ubuntu as 命令行启动的 R 会话中逐步安装其依赖项，然后成功安装（和其他软件包）ruser，但未能做到这一点从 RStudio 服务器中？

对于在我的 R 环境中理解和解决这个系统性问题的任何建议，我将不胜感激！

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