我已经运行了一个 MATLAB 程序将近六个小时,但它仍然不完整。它循环通过三个while循环(外部两个循环为n = 855,内部循环为n = 500)。花了这么长时间,这是否令人惊讶?有什么办法可以提高速度吗?我包括下面的代码,以及下面的变量数据类型。
while i < (numAtoms + 1)
pointAccessible = ones(numPoints,1);
j = 1;
while j <(numAtoms + 1)
if (i ~= j)
k=1;
while k < (numPoints + 1)
if (pointAccessible(k) == 1)
sphereCoord = [cell2mat(atomX(i)) + p + sphereX(k), cell2mat(atomY(i)) + p + sphereY(k), cell2mat(atomZ(i)) + p + sphereZ(k)];
neighborCoord = [cell2mat(atomX(j)), cell2mat(atomY(j)), cell2mat(atomZ(j))];
coords(1,:) = [sphereCoord];
coords(2,:) = [neighborCoord];
if (pdist(coords) < (atomRadius(j) + p))
pointAccessible(k)=0;
end
end
k = k + 1;
end
end
j = j+1;
end
remainingPoints(i) = sum(pointAccessible);
i = i +1;
end
变量数据类型:
numAtoms = 855
numPoints = 500
p = 1.4
atomRadius = <855 * 1 double>
pointAccessible = <500 * 1 double>
atomX, atomY, atomZ = <1 * 855 cell>
sphereX, sphereY, sphereZ = <500 * 1 double>
remainingPoints = <855 * 1 double>