0

我需要使用文本扫描的帮助。我正在尝试读取具有以下格式的数据:

# ---------------------------------- WARNING ----------------------------------------
# The data you have obtained from this automated U.S. Geological Survey database
# have not received Director's approval and as such are provisional and subject to
# revision.  The data are released on the condition that neither the USGS nor the
# United States Government may be held liable for any damages resulting from its use.
# Additional info: http://nwis.waterdata.usgs.gov/nwis/help/?provisional
#
# File-format description:  http://nwis.waterdata.usgs.gov/nwis/?tab_delimited_format_info
# Automated-retrieval info: http://nwis.waterdata.usgs.gov/nwis/?automated_retrieval_info
#
# Contact:   gs-w_support_nwisweb@usgs.gov
# retrieved: 2013-09-13 13:10:29 EDT       (nadww01)
#
# Data for the following 1 site(s) are contained in this file
#    USGS 08067074 CWA Canal at Thompson Rd nr Baytown, TX
# -----------------------------------------------------------------------------------
#
# Data provided for site 08067074
#    DD parameter   Description
#    01   00010     Temperature, water, degrees Celsius
#    02   00095     Specific conductance, water, unfiltered, microsiemens per centimeter at 25 degrees Celsius
#
# Data-value qualification codes included in this output: 
#     A  Approved for publication -- Processing and review completed.  
#     P  Provisional data subject to revision.  
# 
agency_cd   site_no datetime    tz_cd   01_00010    01_00010_cd 02_00095    02_00095_cd
5s  15s 20d 6s  14n 10s 14n 10s
USGS    08067074    2013-01-05 00:00    CST 10.3    A   391 A
USGS    08067074    2013-01-05 00:15    CST 10.3    A   391 A
USGS    08067074    2013-01-05 00:30    CST 10.3    A   391 A
USGS    08067074    2013-01-05 00:45    CST 10.3    A   391 A
USGS    08067074    2013-01-05 01:00    CST 10.3    A   391 A
USGS    08067074    2013-01-05 01:15    CST 10.3    A   391 A
USGS    08067074    2013-01-05 01:30    CST 10.3    A   391 A
USGS    08067074    2013-01-05 01:45    CST 10.3    A   391 A
USGS    08067074    2013-01-05 02:00    CST 10.3    A   391 A
USGS    08067074    2013-01-05 02:15    CST 10.3    A   391 A
USGS    08067074    2013-01-05 02:30    CST 10.3    A   391 A
USGS    08067074    2013-01-05 02:45    CST 10.2    A   391 A
USGS    08067074    2013-01-05 03:00    CST 10.2    A   391 A
USGS    08067074    2013-01-05 03:15    CST 10.2    A   391 A
USGS    08067074    2013-01-05 03:30    CST 10.2    A   391 A
USGS    08067074    2013-01-05 03:45    CST 10.2    A   391 A
USGS    08067074    2013-01-05 04:00    CST 10.2    A   391 A
USGS    08067074    2013-01-05 04:15    CST 10.2    A   392 A
USGS    08067074    2013-01-05 04:30    CST 10.2    A   391 A
USGS    08067074    2013-01-05 04:45    CST 10.2    A   391 A
USGS    08067074    2013-01-05 05:00    CST 10.2    A   391 A
USGS    08067074    2013-01-05 05:15    CST 10.2    A   391 A
USGS    08067074    2013-01-05 05:30    CST 10.2    A   391 A
USGS    08067074    2013-01-05 05:45    CST 10.2    A   391 A
USGS    08067074    2013-01-05 06:00    CST 10.2    A   391 A
USGS    08067074    2013-01-05 06:15    CST 10.1    A   391 A
USGS    08067074    2013-01-05 06:30    CST 10.1    A   391 A
USGS    08067074    2013-01-05 06:45    CST 10.1    A   391 A
USGS    08067074    2013-01-05 07:00    CST 10.1    A   391 A
USGS    08067074    2013-01-05 07:15    CST 10.1    A   391 A
USGS    08067074    2013-01-05 07:30    CST 10.1    A   390 A
USGS    08067074    2013-01-05 07:45    CST 10.0    A   391 A
USGS    08067074    2013-01-05 08:00    CST 10.0    A   390 A
USGS    08067074    2013-01-05 08:15    CST 10.0    A   391 A
USGS    08067074    2013-01-05 08:30    CST 10.0    A   391 A
USGS    08067074    2013-01-05 08:45    CST 10.0    A   390 A
USGS    08067074    2013-01-05 09:00    CST 10.0    A   390 A
USGS    08067074    2013-01-05 09:15    CST 10  A   390 A
USGS    08067074    2013-01-05 09:30    CST 10  A   390 A
USGS    08067074    2013-01-05 09:45    CST 10  A   390 A
USGS    08067074    2013-01-05 10:00    CST 10  A   390 A
USGS    08067074    2013-01-05 10:15    CST 10  A   390 A
USGS    08067074    2013-01-05 10:30    CST 10  A   390 A
USGS    08067074    2013-01-05 10:45    CST 10  A   390 A
USGS    08067074    2013-01-05 11:00    CST 10  A   390 A
USGS    08067074    2013-01-05 11:15    CST 10  A   390 A
USGS    08067074    2013-01-05 11:30    CST 10  A   390 A
USGS    08067074    2013-01-05 11:45    CST 10  A   389 A
USGS    08067074    2013-01-05 12:00    CST 10  A   389 A
USGS    08067074    2013-01-05 12:15    CST 10  A   389 A
USGS    08067074    2013-01-05 12:30    CST 10  A   389 A
USGS    08067074    2013-01-05 12:45    CST 10  A   389 A
USGS    08067074    2013-01-05 13:00    CST 10  A   389 A
USGS    08067074    2013-01-05 13:15    CST 10  A   389 A
USGS    08067074    2013-01-05 13:30    CST 10  A   389 A

我关心的唯一两个数据条目是“比电导”和“日期”。(分别为第 3 列和第 7 列)

我能够使用以下代码在一致的基础上做到这一点:

%% 
% Collect conductance data
filename = 'conductivityData_Temp_File';


%%
% Determine length of data file 
fid = fopen('conductivityData_Temp_File','r');
fseek(fid, 0, 'eof');
chunksize = ftell(fid);
fseek(fid, 0, 'bof');
ch = fread(fid, chunksize, '*uchar');
N = sum(ch == sprintf('\n')); % number of lines
fclose(fid)

%% 
% Read conductivity data
fileconductID = fopen(filename);
waterConductivityData = textscan(fileconductID, '%s %d %s %s %f %s %f %s', N, 'delimiter', '\t', 'EmptyValue', 0, 'headerlines', 27);
fclose(fileconductID);

但是,我发现您可以简单地使用“commentstyle”来忽略评论。这很重要,因为我正在阅读多个文件,有时我会遇到一个不包含 27 行注释的文件。这将使我的程序抛出错误。

有人可以告诉我如何调整我的 textscan 代码以忽略注释行并跳过两个标题行吗?

如果我提供的示例代码很复杂,我深表歉意,但基本上我的错误在于这一行代码:

waterConductivityData = textscan(fileconductID, '%s %d %s %s %f %s %f %s', N, 'delimiter', '\t', 'EmptyValue', 0, 'headerlines', 27);

(如果您想下载一个示例制表符分隔文件以使用此链接: 这里

谢谢!

回答:


谢谢 TryHard,这是一个很好的方法,但我想更接近我之前所做的事情。显然我的分隔符已关闭。

waterConductivityData = textscan(fileconductID,'%s %s %s %s %s %s %s %s %s ' , 'Delimiter', '\t', 'CommentStyle', '#');

dates = waterConductivityData{3}(3:end);
conductancesStr = waterConductivityData{7}(3:end);
temperaturesStr = waterConductivityData{5}(3:end);

conductances = str2double(conductancesStr);
temperatures = str2double(temperaturesStr);
4

2 回答 2

1

将您的 textscan 行更改为:

waterConductivityData = textscan(fileconductID, '%s %d %s %s %f %s %f %s', N, 'Delimiter', '\t', 'EmptyValue', 0, 'CommentStyle', '#');

然后像这样得到你想要的列:

dates = waterConductivityData{3}(3:end)
conductances = waterConductivityData{7}(3:end)
于 2013-09-13T17:56:40.853 回答
0

规避可变标头长度的一种方法是按如下方式解析文件:

fid=fopen(file);
str=textscan(fid,'%s')
fclose(fid)

str2=strvcat(str{1});
fst=strmatch('CST',str2);

dtstr = str2(fst(1)-2:9:end,:);   % date strings
timstr = str2(fst(1)-1:9:end,:);  % time strings
condctv = str2(fst(1)+3:9:end,:); % conductivity string

这会找到字符串“CST”的第一次出现,并假设数据行在所有文件中的组织方式相似,并且它要求“CST”出现在表的第一个数据行中。如果这在您的数据文件中不是一个常数,那么这个想法就失败了。但是,您可能可以使用其他字符串来绘制数据表,假设它们是唯一的并且总是出现在同一个地方。以下使用格式字符串中的最后一个格式说明符:

str2=strvcat(str{1});
fst=strmatch('10s',str2);
fst=fst(end);

dtstr = str2(fst+3:9:end,:);
timstr = str2(fst+4:9:end,:);
condctv = str2(fst+8:9:end,:);

您可以使用 将字符串转换condctv为数字数据str2num,如下所示:

condctv = str2num(conductv);
于 2013-09-13T18:07:43.437 回答